ERF_InitCustomPertVels_Bomex.H

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    ParmParse pp_prob("prob");
 
    Real U_0 = 0.0; pp_prob.query("U_0", U_0);
    Real V_0 = 0.0; pp_prob.query("V_0", V_0);
    Real W_0 = 0.0; pp_prob.query("W_0", W_0);
 
    // random initial perturbations (legacy code)
    Real U_0_Pert_Mag  = 0.0; pp_prob.query("U_0_Pert_Mag", U_0_Pert_Mag);
    Real V_0_Pert_Mag  = 0.0; pp_prob.query("V_0_Pert_Mag", V_0_Pert_Mag);
    Real W_0_Pert_Mag  = 0.0; pp_prob.query("W_0_Pert_Mag", W_0_Pert_Mag);
    Real qv_0_Pert_Mag = 0.0; pp_prob.query("qv_0_Pert_Mag", qv_0_Pert_Mag);
 
    // divergence-free initial perturbations
    Real pert_deltaU     =   0.0; pp_prob.query("pert_deltaU", pert_deltaU);
    Real pert_deltaV     =   0.0; pp_prob.query("pert_deltaV", pert_deltaV);
    Real pert_periods_U  =   5.0; pp_prob.query("pert_periods_U", pert_periods_U);
    Real pert_periods_V  =   5.0; pp_prob.query("pert_periods_V", pert_periods_V);
    Real pert_ref_height = 100.0; pp_prob.query("pert_ref_height", pert_ref_height);
 
   auto problo = geomdata.ProbLo();
   auto probhi = geomdata.ProbHi();
 
    Real aval = pert_periods_U * 2.0 * PI / (probhi[1] - problo[1]);
    Real bval = pert_periods_V * 2.0 * PI / (probhi[0] - problo[0]);
    Real ufac = pert_deltaU * std::exp(0.5) / pert_ref_height;
    Real vfac = pert_deltaV * std::exp(0.5) / pert_ref_height;
 
    // Set the x-velocity
    ParallelForRNG(xbx, [=] AMREX_GPU_DEVICE(int i, int j, int k, const RandomEngine& engine) noexcept
    {
        const Real* prob_lo = geomdata.ProbLo();
        const Real* dx = geomdata.CellSize();
        const Real y = prob_lo[1] + (j + 0.5) * dx[1];
        const Real z = prob_lo[2] + (k + 0.5) * dx[2];
 
        // Set the x-velocity
        x_vel_pert(i, j, k) = U_0;
        if ((z <= pert_ref_height) && (U_0_Pert_Mag != 0.0))
        {
            Real rand_double = amrex::Random(engine); // Between 0.0 and 1.0
            Real x_vel_prime = (rand_double*2.0 - 1.0)*U_0_Pert_Mag;
            x_vel_pert(i, j, k) += x_vel_prime;
        }
        if (pert_deltaU != 0.0)
        {
            const amrex::Real yl = y - prob_lo[1];
            const amrex::Real zl = z / pert_ref_height;
            const amrex::Real damp = std::exp(-0.5 * zl * zl);
            x_vel_pert(i, j, k) += ufac * damp * z * std::cos(aval * yl);
        }
    });
 
  // Set the y-velocity
  ParallelForRNG(ybx, [=] AMREX_GPU_DEVICE(int i, int j, int k, const RandomEngine& engine) noexcept
  {
      const Real* prob_lo = geomdata.ProbLo();
      const Real* dx = geomdata.CellSize();
      const Real x = prob_lo[0] + (i + 0.5) * dx[0];
      const Real z = prob_lo[2] + (k + 0.5) * dx[2];
 
      // Set the y-velocity
      y_vel_pert(i, j, k) = V_0;
      if ((z <= pert_ref_height) && (V_0_Pert_Mag != 0.0))
      {
          Real rand_double = amrex::Random(engine); // Between 0.0 and 1.0
          Real y_vel_prime = (rand_double*2.0 - 1.0)*V_0_Pert_Mag;
          y_vel_pert(i, j, k) += y_vel_prime;
      }
      if (pert_deltaV != 0.0)
      {
          const amrex::Real xl = x - prob_lo[0];
          const amrex::Real zl = z / pert_ref_height;
          const amrex::Real damp = std::exp(-0.5 * zl * zl);
          y_vel_pert(i, j, k) += vfac * damp * z * std::cos(bval * xl);
      }
  });
 
  // Set the z-velocity
  ParallelForRNG(zbx, [=] AMREX_GPU_DEVICE(int i, int j, int k, const RandomEngine& engine) noexcept
  {
      const int dom_lo_z = geomdata.Domain().smallEnd()[2];
      const int dom_hi_z = geomdata.Domain().bigEnd()[2];
// Set the z-velocity
      if (k == dom_lo_z || k == dom_hi_z+1)
      {
          z_vel_pert(i, j, k) = 0.0;
      }
      else if (W_0_Pert_Mag != 0.0)
      {
          Real rand_double = amrex::Random(engine); // Between 0.0 and 1.0
          Real z_vel_prime = (rand_double*2.0 - 1.0)*W_0_Pert_Mag;
          z_vel_pert(i, j, k) = W_0 + z_vel_prime;
      }
  });