ERF_TI_slow_headers.H File Reference

#include "AMReX_MultiFab.H"
#include "AMReX_BCRec.H"
#include "AMReX_YAFluxRegister.H"
#include "AMReX_MultiCutFab.H"
#include "AMReX_EBMultiFabUtil.H"
#include "ERF_DataStruct.H"
#include "ERF_IndexDefines.H"
#include "ERF_SurfaceLayer.H"
#include "ERF_Advection.H"
#include "ERF_Diffusion.H"
#include "ERF_EddyViscosity.H"
#include "ERF_PlaneAverage.H"
#include "ERF_TerrainMetrics.H"
#include "ERF_TileNoZ.H"
#include "ERF_EB.H"

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Functions
void	erf_make_tau_terms (int level, int nrk, const amrex::Vector< amrex::BCRec > &domain_bcs_type, const amrex::MultiFab &z_phys_nd, amrex::Vector< amrex::MultiFab > &S_data, const amrex::MultiFab &xvel, const amrex::MultiFab &yvel, const amrex::MultiFab &zvel, amrex::Vector< std::unique_ptr< amrex::MultiFab >> &Tau_lev, amrex::MultiFab *SmnSmn, amrex::MultiFab *eddyDiffs, const amrex::Geometry geom, const SolverChoice &solverChoice, std::unique_ptr< SurfaceLayer > &SurfLayer, const amrex::MultiFab &detJ, amrex::Vector< std::unique_ptr< amrex::MultiFab >> &mapfac)
void	erf_slow_rhs_pre (int level, int finest_level, int nrk, amrex::Real dt, amrex::Vector< amrex::MultiFab > &S_rhs, amrex::Vector< amrex::MultiFab > &S_old, amrex::Vector< amrex::MultiFab > &S_data, const amrex::MultiFab &S_prim, const amrex::MultiFab &qt, amrex::Vector< amrex::MultiFab > &S_scratch, const amrex::MultiFab &xvel, const amrex::MultiFab &yvel, const amrex::MultiFab &zvel, std::unique_ptr< amrex::MultiFab > &z_t, const amrex::MultiFab &cc_src, const amrex::MultiFab &xmom_src, const amrex::MultiFab &ymom_src, const amrex::MultiFab &zmom_src, const amrex::MultiFab &buoyancy, const amrex::MultiFab *zmom_crse_rhs, amrex::Vector< std::unique_ptr< amrex::MultiFab >> &Tau_lev, amrex::MultiFab *SmnSmn, amrex::MultiFab *eddyDiffs, amrex::MultiFab *Hfx1, amrex::MultiFab *Hfx2, amrex::MultiFab *Hfx3, amrex::MultiFab *Q1fx1, amrex::MultiFab *Q1fx2, amrex::MultiFab *Q1fx3, amrex::MultiFab *Q2fx3, amrex::MultiFab *Diss, const amrex::Geometry geom, const SolverChoice &solverChoice, std::unique_ptr< SurfaceLayer > &SurfLayer, const amrex::Gpu::DeviceVector< amrex::BCRec > &domain_bcs_type_d, const amrex::Vector< amrex::BCRec > &domain_bcs_type, const amrex::MultiFab &z_phys_nd, const amrex::MultiFab &ax, const amrex::MultiFab &ay, const amrex::MultiFab &az, const amrex::MultiFab &dJ, amrex::Gpu::DeviceVector< amrex::Real > &stretched_dz_d, amrex::Vector< amrex::MultiFab > &gradp, amrex::Vector< std::unique_ptr< amrex::MultiFab >> &mapfac, const eb_ &ebfact, amrex::YAFluxRegister *fr_as_crse, amrex::YAFluxRegister *fr_as_fine)
void	erf_slow_rhs_post (int level, int finest_level, int nrk, amrex::Real dt, int n_qstate, amrex::Vector< amrex::MultiFab > &S_rhs, amrex::Vector< amrex::MultiFab > &S_old, amrex::Vector< amrex::MultiFab > &S_new, amrex::Vector< amrex::MultiFab > &S_data, const amrex::MultiFab &S_prim, amrex::Vector< amrex::MultiFab > &S_scratch, const amrex::MultiFab &xvel, const amrex::MultiFab &yvel, const amrex::MultiFab &zvel, const amrex::MultiFab &source, const amrex::MultiFab *SmnSmn, const amrex::MultiFab *eddyDiffs, amrex::MultiFab *Hfx1, amrex::MultiFab *Hfx2, amrex::MultiFab *Hfx3, amrex::MultiFab *Q1fx1, amrex::MultiFab *Q1fx2, amrex::MultiFab *Q1fx3, amrex::MultiFab *Q2fx3, amrex::MultiFab *Diss, const amrex::Geometry geom, const SolverChoice &solverChoice, std::unique_ptr< SurfaceLayer > &SurfLayer, const amrex::Gpu::DeviceVector< amrex::BCRec > &domain_bcs_type_d, const amrex::Vector< amrex::BCRec > &domain_bcs_type, std::unique_ptr< amrex::MultiFab > &z_phys_nd, std::unique_ptr< amrex::MultiFab > &ax, std::unique_ptr< amrex::MultiFab > &ay, std::unique_ptr< amrex::MultiFab > &az, std::unique_ptr< amrex::MultiFab > &dJ_old, amrex::MultiFab *dJ_new, amrex::Vector< std::unique_ptr< amrex::MultiFab >> &mapfac, amrex::EBFArrayBoxFactory const &ebfact, amrex::YAFluxRegister *fr_as_crse, amrex::YAFluxRegister *fr_as_fine)

Function Documentation

erf_make_tau_terms()

void erf_make_tau_terms	(	int	level,
		int	nrk,
		const amrex::Vector< amrex::BCRec > &	domain_bcs_type,
		const amrex::MultiFab &	z_phys_nd,
		amrex::Vector< amrex::MultiFab > &	S_data,
		const amrex::MultiFab &	xvel,
		const amrex::MultiFab &	yvel,
		const amrex::MultiFab &	zvel,
		amrex::Vector< std::unique_ptr< amrex::MultiFab >> &	Tau_lev,
		amrex::MultiFab *	SmnSmn,
		amrex::MultiFab *	eddyDiffs,
		const amrex::Geometry	geom,
		const SolverChoice &	solverChoice,
		std::unique_ptr< SurfaceLayer > &	SurfLayer,
		const amrex::MultiFab &	detJ,
		amrex::Vector< std::unique_ptr< amrex::MultiFab >> &	mapfac
	)

erf_slow_rhs_post()

void erf_slow_rhs_post	(	int	level,
		int	finest_level,
		int	nrk,
		amrex::Real	dt,
		int	n_qstate,
		amrex::Vector< amrex::MultiFab > &	S_rhs,
		amrex::Vector< amrex::MultiFab > &	S_old,
		amrex::Vector< amrex::MultiFab > &	S_new,
		amrex::Vector< amrex::MultiFab > &	S_data,
		const amrex::MultiFab &	S_prim,
		amrex::Vector< amrex::MultiFab > &	S_scratch,
		const amrex::MultiFab &	xvel,
		const amrex::MultiFab &	yvel,
		const amrex::MultiFab &	zvel,
		const amrex::MultiFab &	source,
		const amrex::MultiFab *	SmnSmn,
		const amrex::MultiFab *	eddyDiffs,
		amrex::MultiFab *	Hfx1,
		amrex::MultiFab *	Hfx2,
		amrex::MultiFab *	Hfx3,
		amrex::MultiFab *	Q1fx1,
		amrex::MultiFab *	Q1fx2,
		amrex::MultiFab *	Q1fx3,
		amrex::MultiFab *	Q2fx3,
		amrex::MultiFab *	Diss,
		const amrex::Geometry	geom,
		const SolverChoice &	solverChoice,
		std::unique_ptr< SurfaceLayer > &	SurfLayer,
		const amrex::Gpu::DeviceVector< amrex::BCRec > &	domain_bcs_type_d,
		const amrex::Vector< amrex::BCRec > &	domain_bcs_type,
		std::unique_ptr< amrex::MultiFab > &	z_phys_nd,
		std::unique_ptr< amrex::MultiFab > &	ax,
		std::unique_ptr< amrex::MultiFab > &	ay,
		std::unique_ptr< amrex::MultiFab > &	az,
		std::unique_ptr< amrex::MultiFab > &	dJ_old,
		amrex::MultiFab *	dJ_new,
		amrex::Vector< std::unique_ptr< amrex::MultiFab >> &	mapfac,
		amrex::EBFArrayBoxFactory const &	ebfact,
		amrex::YAFluxRegister *	fr_as_crse,
		amrex::YAFluxRegister *	fr_as_fine
	)

Function for computing the slow RHS for the evolution equations for the scalars other than density or potential temperature

erf_slow_rhs_pre()

void erf_slow_rhs_pre	(	int	level,
		int	finest_level,
		int	nrk,
		amrex::Real	dt,
		amrex::Vector< amrex::MultiFab > &	S_rhs,
		amrex::Vector< amrex::MultiFab > &	S_old,
		amrex::Vector< amrex::MultiFab > &	S_data,
		const amrex::MultiFab &	S_prim,
		const amrex::MultiFab &	qt,
		amrex::Vector< amrex::MultiFab > &	S_scratch,
		const amrex::MultiFab &	xvel,
		const amrex::MultiFab &	yvel,
		const amrex::MultiFab &	zvel,
		std::unique_ptr< amrex::MultiFab > &	z_t,
		const amrex::MultiFab &	cc_src,
		const amrex::MultiFab &	xmom_src,
		const amrex::MultiFab &	ymom_src,
		const amrex::MultiFab &	zmom_src,
		const amrex::MultiFab &	buoyancy,
		const amrex::MultiFab *	zmom_crse_rhs,
		amrex::Vector< std::unique_ptr< amrex::MultiFab >> &	Tau_lev,
		amrex::MultiFab *	SmnSmn,
		amrex::MultiFab *	eddyDiffs,
		amrex::MultiFab *	Hfx1,
		amrex::MultiFab *	Hfx2,
		amrex::MultiFab *	Hfx3,
		amrex::MultiFab *	Q1fx1,
		amrex::MultiFab *	Q1fx2,
		amrex::MultiFab *	Q1fx3,
		amrex::MultiFab *	Q2fx3,
		amrex::MultiFab *	Diss,
		const amrex::Geometry	geom,
		const SolverChoice &	solverChoice,
		std::unique_ptr< SurfaceLayer > &	SurfLayer,
		const amrex::Gpu::DeviceVector< amrex::BCRec > &	domain_bcs_type_d,
		const amrex::Vector< amrex::BCRec > &	domain_bcs_type,
		const amrex::MultiFab &	z_phys_nd,
		const amrex::MultiFab &	ax,
		const amrex::MultiFab &	ay,
		const amrex::MultiFab &	az,
		const amrex::MultiFab &	dJ,
		amrex::Gpu::DeviceVector< amrex::Real > &	stretched_dz_d,
		amrex::Vector< amrex::MultiFab > &	gradp,
		amrex::Vector< std::unique_ptr< amrex::MultiFab >> &	mapfac,
		const eb_ &	ebfact,
		amrex::YAFluxRegister *	fr_as_crse,
		amrex::YAFluxRegister *	fr_as_fine
	)

Function for computing the slow RHS for the evolution equations for the density, potential temperature and momentum.