ERF_Diffusion.H File Reference

#include <AMReX.H>
#include <AMReX_MultiFab.H>
#include <AMReX_BCRec.H>
#include <ERF_DataStruct.H>
#include <ERF_IndexDefines.H>
#include <ERF_ABLMost.H>

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Functions
void	DiffusionSrcForMom_N (const amrex::Box &bxx, const amrex::Box &bxy, const amrex::Box &bxz, const amrex::Array4< amrex::Real > &rho_u_rhs, const amrex::Array4< amrex::Real > &rho_v_rhs, const amrex::Array4< amrex::Real > &rho_w_rhs, const amrex::Array4< const amrex::Real > &tau11, const amrex::Array4< const amrex::Real > &tau22, const amrex::Array4< const amrex::Real > &tau33, const amrex::Array4< const amrex::Real > &tau12, const amrex::Array4< const amrex::Real > &tau13, const amrex::Array4< const amrex::Real > &tau23, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &dxInv, const amrex::Array4< const amrex::Real > &mf_m, const amrex::Array4< const amrex::Real > &mf_u, const amrex::Array4< const amrex::Real > &mf_v)
void	DiffusionSrcForMom_T (const amrex::Box &bxx, const amrex::Box &bxy, const amrex::Box &bxz, const amrex::Array4< amrex::Real > &rho_u_rhs, const amrex::Array4< amrex::Real > &rho_v_rhs, const amrex::Array4< amrex::Real > &rho_w_rhs, const amrex::Array4< const amrex::Real > &tau11, const amrex::Array4< const amrex::Real > &tau22, const amrex::Array4< const amrex::Real > &tau33, const amrex::Array4< const amrex::Real > &tau12, const amrex::Array4< const amrex::Real > &tau13, const amrex::Array4< const amrex::Real > &tau21, const amrex::Array4< const amrex::Real > &tau23, const amrex::Array4< const amrex::Real > &tau31, const amrex::Array4< const amrex::Real > &tau32, const amrex::Array4< const amrex::Real > &detJ, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &dxInv, const amrex::Array4< const amrex::Real > &mf_m, const amrex::Array4< const amrex::Real > &mf_u, const amrex::Array4< const amrex::Real > &mf_v)
void	DiffusionSrcForState_N (const amrex::Box &bx, const amrex::Box &domain, int start_comp, int num_comp, const bool &exp_most, const amrex::Array4< const amrex::Real > &u, const amrex::Array4< const amrex::Real > &v, const amrex::Array4< const amrex::Real > &cell_data, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< amrex::Real > &cell_rhs, const amrex::Array4< amrex::Real > &xflux, const amrex::Array4< amrex::Real > &yflux, const amrex::Array4< amrex::Real > &zflux, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &cellSizeInv, const amrex::Array4< const amrex::Real > &SmnSmn_a, const amrex::Array4< const amrex::Real > &mf_m, const amrex::Array4< const amrex::Real > &mf_u, const amrex::Array4< const amrex::Real > &mf_v, amrex::Array4< amrex::Real > &hfx_z, amrex::Array4< amrex::Real > &qfx1_z, amrex::Array4< amrex::Real > &qfx2_z, amrex::Array4< amrex::Real > &diss, const amrex::Array4< const amrex::Real > &mu_turb, const SolverChoice &solverChoice, const int level, const amrex::Array4< const amrex::Real > &tm_arr, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > grav_gpu, const amrex::BCRec *bc_ptr, const bool use_most)
void	DiffusionSrcForState_T (const amrex::Box &bx, const amrex::Box &domain, int start_comp, int num_comp, const bool &exp_most, const bool &rot_most, const amrex::Array4< const amrex::Real > &u, const amrex::Array4< const amrex::Real > &v, const amrex::Array4< const amrex::Real > &cell_data, const amrex::Array4< const amrex::Real > &cell_prim, const amrex::Array4< amrex::Real > &cell_rhs, const amrex::Array4< amrex::Real > &xflux, const amrex::Array4< amrex::Real > &yflux, const amrex::Array4< amrex::Real > &zflux, const amrex::Array4< const amrex::Real > &z_nd, const amrex::Array4< const amrex::Real > &ax, const amrex::Array4< const amrex::Real > &ay, const amrex::Array4< const amrex::Real > &az, const amrex::Array4< const amrex::Real > &detJ, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &dxInv, const amrex::Array4< const amrex::Real > &SmnSmn_a, const amrex::Array4< const amrex::Real > &mf_m, const amrex::Array4< const amrex::Real > &mf_u, const amrex::Array4< const amrex::Real > &mf_v, amrex::Array4< amrex::Real > &hfx_x, amrex::Array4< amrex::Real > &hfx_y, amrex::Array4< amrex::Real > &hfx_z, amrex::Array4< amrex::Real > &qfx1_x, amrex::Array4< amrex::Real > &qfx1_y, amrex::Array4< amrex::Real > &qfx1_z, amrex::Array4< amrex::Real > &qfx2_z, amrex::Array4< amrex::Real > &diss, const amrex::Array4< const amrex::Real > &mu_turb, const SolverChoice &solverChoice, const int level, const amrex::Array4< const amrex::Real > &tm_arr, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > grav_gpu, const amrex::BCRec *bc_ptr, const bool use_most)
void	ComputeStressConsVisc_N (amrex::Box bxcc, amrex::Box tbxxy, amrex::Box tbxxz, amrex::Box tbxyz, amrex::Real mu_eff, const amrex::Array4< const amrex::Real > &cell_data, amrex::Array4< amrex::Real > &tau11, amrex::Array4< amrex::Real > &tau22, amrex::Array4< amrex::Real > &tau33, amrex::Array4< amrex::Real > &tau12, amrex::Array4< amrex::Real > &tau13, amrex::Array4< amrex::Real > &tau23, const amrex::Array4< const amrex::Real > &er_arr)
void	ComputeStressConsVisc_T (amrex::Box bxcc, amrex::Box tbxxy, amrex::Box tbxxz, amrex::Box tbxyz, amrex::Real mu_eff, const amrex::Array4< const amrex::Real > &cell_data, amrex::Array4< amrex::Real > &tau11, amrex::Array4< amrex::Real > &tau22, amrex::Array4< amrex::Real > &tau33, amrex::Array4< amrex::Real > &tau12, amrex::Array4< amrex::Real > &tau13, amrex::Array4< amrex::Real > &tau21, amrex::Array4< amrex::Real > &tau23, amrex::Array4< amrex::Real > &tau31, amrex::Array4< amrex::Real > &tau32, const amrex::Array4< const amrex::Real > &er_arr, const amrex::Array4< const amrex::Real > &z_nd, const amrex::Array4< const amrex::Real > &detJ, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &dxInv)
void	ComputeStressVarVisc_N (amrex::Box bxcc, amrex::Box tbxxy, amrex::Box tbxxz, amrex::Box tbxyz, amrex::Real mu_eff, const amrex::Array4< const amrex::Real > &mu_turb, const amrex::Array4< const amrex::Real > &cell_data, amrex::Array4< amrex::Real > &tau11, amrex::Array4< amrex::Real > &tau22, amrex::Array4< amrex::Real > &tau33, amrex::Array4< amrex::Real > &tau12, amrex::Array4< amrex::Real > &tau13, amrex::Array4< amrex::Real > &tau23, const amrex::Array4< const amrex::Real > &er_arr)
void	ComputeStressVarVisc_T (amrex::Box bxcc, amrex::Box tbxxy, amrex::Box tbxxz, amrex::Box tbxyz, amrex::Real mu_eff, const amrex::Array4< const amrex::Real > &mu_turb, const amrex::Array4< const amrex::Real > &cell_data, amrex::Array4< amrex::Real > &tau11, amrex::Array4< amrex::Real > &tau22, amrex::Array4< amrex::Real > &tau33, amrex::Array4< amrex::Real > &tau12, amrex::Array4< amrex::Real > &tau13, amrex::Array4< amrex::Real > &tau21, amrex::Array4< amrex::Real > &tau23, amrex::Array4< amrex::Real > &tau31, amrex::Array4< amrex::Real > &tau32, const amrex::Array4< const amrex::Real > &er_arr, const amrex::Array4< const amrex::Real > &z_nd, const amrex::Array4< const amrex::Real > &detJ, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &dxInv)
void	ComputeStrain_N (amrex::Box bxcc, amrex::Box tbxxy, amrex::Box tbxxz, amrex::Box tbxyz, amrex::Box domain, const amrex::Array4< const amrex::Real > &u, const amrex::Array4< const amrex::Real > &v, const amrex::Array4< const amrex::Real > &w, amrex::Array4< amrex::Real > &tau11, amrex::Array4< amrex::Real > &tau22, amrex::Array4< amrex::Real > &tau33, amrex::Array4< amrex::Real > &tau12, amrex::Array4< amrex::Real > &tau13, amrex::Array4< amrex::Real > &tau23, const amrex::BCRec *bc_ptr, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &dxInv, const amrex::Array4< const amrex::Real > &mf_m, const amrex::Array4< const amrex::Real > &mf_u, const amrex::Array4< const amrex::Real > &mf_v)
void	ComputeStrain_T (amrex::Box bxcc, amrex::Box tbxxy, amrex::Box tbxxz, amrex::Box tbxyz, amrex::Box domain, const amrex::Array4< const amrex::Real > &u, const amrex::Array4< const amrex::Real > &v, const amrex::Array4< const amrex::Real > &w, amrex::Array4< amrex::Real > &tau11, amrex::Array4< amrex::Real > &tau22, amrex::Array4< amrex::Real > &tau33, amrex::Array4< amrex::Real > &tau12, amrex::Array4< amrex::Real > &tau13, amrex::Array4< amrex::Real > &tau21, amrex::Array4< amrex::Real > &tau23, amrex::Array4< amrex::Real > &tau31, amrex::Array4< amrex::Real > &tau32, const amrex::Array4< const amrex::Real > &z_nd, const amrex::Array4< const amrex::Real > &detJ, const amrex::BCRec *bc_ptr, const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &dxInv, const amrex::Array4< const amrex::Real > &mf_m, const amrex::Array4< const amrex::Real > &mf_u, const amrex::Array4< const amrex::Real > &mf_v)

Function Documentation

ComputeStrain_N()

void ComputeStrain_N	(	amrex::Box	bxcc,
		amrex::Box	tbxxy,
		amrex::Box	tbxxz,
		amrex::Box	tbxyz,
		amrex::Box	domain,
		const amrex::Array4< const amrex::Real > &	u,
		const amrex::Array4< const amrex::Real > &	v,
		const amrex::Array4< const amrex::Real > &	w,
		amrex::Array4< amrex::Real > &	tau11,
		amrex::Array4< amrex::Real > &	tau22,
		amrex::Array4< amrex::Real > &	tau33,
		amrex::Array4< amrex::Real > &	tau12,
		amrex::Array4< amrex::Real > &	tau13,
		amrex::Array4< amrex::Real > &	tau23,
		const amrex::BCRec *	bc_ptr,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &	dxInv,
		const amrex::Array4< const amrex::Real > &	mf_m,
		const amrex::Array4< const amrex::Real > &	mf_u,
		const amrex::Array4< const amrex::Real > &	mf_v
	)

ComputeStrain_T()

void ComputeStrain_T	(	amrex::Box	bxcc,
		amrex::Box	tbxxy,
		amrex::Box	tbxxz,
		amrex::Box	tbxyz,
		amrex::Box	domain,
		const amrex::Array4< const amrex::Real > &	u,
		const amrex::Array4< const amrex::Real > &	v,
		const amrex::Array4< const amrex::Real > &	w,
		amrex::Array4< amrex::Real > &	tau11,
		amrex::Array4< amrex::Real > &	tau22,
		amrex::Array4< amrex::Real > &	tau33,
		amrex::Array4< amrex::Real > &	tau12,
		amrex::Array4< amrex::Real > &	tau13,
		amrex::Array4< amrex::Real > &	tau21,
		amrex::Array4< amrex::Real > &	tau23,
		amrex::Array4< amrex::Real > &	tau31,
		amrex::Array4< amrex::Real > &	tau32,
		const amrex::Array4< const amrex::Real > &	z_nd,
		const amrex::Array4< const amrex::Real > &	detJ,
		const amrex::BCRec *	bc_ptr,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &	dxInv,
		const amrex::Array4< const amrex::Real > &	mf_m,
		const amrex::Array4< const amrex::Real > &	mf_u,
		const amrex::Array4< const amrex::Real > &	mf_v
	)

ComputeStressConsVisc_N()

void ComputeStressConsVisc_N	(	amrex::Box	bxcc,
		amrex::Box	tbxxy,
		amrex::Box	tbxxz,
		amrex::Box	tbxyz,
		amrex::Real	mu_eff,
		const amrex::Array4< const amrex::Real > &	cell_data,
		amrex::Array4< amrex::Real > &	tau11,
		amrex::Array4< amrex::Real > &	tau22,
		amrex::Array4< amrex::Real > &	tau33,
		amrex::Array4< amrex::Real > &	tau12,
		amrex::Array4< amrex::Real > &	tau13,
		amrex::Array4< amrex::Real > &	tau23,
		const amrex::Array4< const amrex::Real > &	er_arr
	)

ComputeStressConsVisc_T()

void ComputeStressConsVisc_T	(	amrex::Box	bxcc,
		amrex::Box	tbxxy,
		amrex::Box	tbxxz,
		amrex::Box	tbxyz,
		amrex::Real	mu_eff,
		const amrex::Array4< const amrex::Real > &	cell_data,
		amrex::Array4< amrex::Real > &	tau11,
		amrex::Array4< amrex::Real > &	tau22,
		amrex::Array4< amrex::Real > &	tau33,
		amrex::Array4< amrex::Real > &	tau12,
		amrex::Array4< amrex::Real > &	tau13,
		amrex::Array4< amrex::Real > &	tau21,
		amrex::Array4< amrex::Real > &	tau23,
		amrex::Array4< amrex::Real > &	tau31,
		amrex::Array4< amrex::Real > &	tau32,
		const amrex::Array4< const amrex::Real > &	er_arr,
		const amrex::Array4< const amrex::Real > &	z_nd,
		const amrex::Array4< const amrex::Real > &	detJ,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &	dxInv
	)

ComputeStressVarVisc_N()

void ComputeStressVarVisc_N	(	amrex::Box	bxcc,
		amrex::Box	tbxxy,
		amrex::Box	tbxxz,
		amrex::Box	tbxyz,
		amrex::Real	mu_eff,
		const amrex::Array4< const amrex::Real > &	mu_turb,
		const amrex::Array4< const amrex::Real > &	cell_data,
		amrex::Array4< amrex::Real > &	tau11,
		amrex::Array4< amrex::Real > &	tau22,
		amrex::Array4< amrex::Real > &	tau33,
		amrex::Array4< amrex::Real > &	tau12,
		amrex::Array4< amrex::Real > &	tau13,
		amrex::Array4< amrex::Real > &	tau23,
		const amrex::Array4< const amrex::Real > &	er_arr
	)

ComputeStressVarVisc_T()

void ComputeStressVarVisc_T	(	amrex::Box	bxcc,
		amrex::Box	tbxxy,
		amrex::Box	tbxxz,
		amrex::Box	tbxyz,
		amrex::Real	mu_eff,
		const amrex::Array4< const amrex::Real > &	mu_turb,
		const amrex::Array4< const amrex::Real > &	cell_data,
		amrex::Array4< amrex::Real > &	tau11,
		amrex::Array4< amrex::Real > &	tau22,
		amrex::Array4< amrex::Real > &	tau33,
		amrex::Array4< amrex::Real > &	tau12,
		amrex::Array4< amrex::Real > &	tau13,
		amrex::Array4< amrex::Real > &	tau21,
		amrex::Array4< amrex::Real > &	tau23,
		amrex::Array4< amrex::Real > &	tau31,
		amrex::Array4< amrex::Real > &	tau32,
		const amrex::Array4< const amrex::Real > &	er_arr,
		const amrex::Array4< const amrex::Real > &	z_nd,
		const amrex::Array4< const amrex::Real > &	detJ,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &	dxInv
	)

DiffusionSrcForMom_N()

void DiffusionSrcForMom_N	(	const amrex::Box &	bxx,
		const amrex::Box &	bxy,
		const amrex::Box &	bxz,
		const amrex::Array4< amrex::Real > &	rho_u_rhs,
		const amrex::Array4< amrex::Real > &	rho_v_rhs,
		const amrex::Array4< amrex::Real > &	rho_w_rhs,
		const amrex::Array4< const amrex::Real > &	tau11,
		const amrex::Array4< const amrex::Real > &	tau22,
		const amrex::Array4< const amrex::Real > &	tau33,
		const amrex::Array4< const amrex::Real > &	tau12,
		const amrex::Array4< const amrex::Real > &	tau13,
		const amrex::Array4< const amrex::Real > &	tau23,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &	dxInv,
		const amrex::Array4< const amrex::Real > &	mf_m,
		const amrex::Array4< const amrex::Real > &	mf_u,
		const amrex::Array4< const amrex::Real > &	mf_v
	)

Referenced by erf_slow_rhs_pre().

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DiffusionSrcForMom_T()

void DiffusionSrcForMom_T	(	const amrex::Box &	bxx,
		const amrex::Box &	bxy,
		const amrex::Box &	bxz,
		const amrex::Array4< amrex::Real > &	rho_u_rhs,
		const amrex::Array4< amrex::Real > &	rho_v_rhs,
		const amrex::Array4< amrex::Real > &	rho_w_rhs,
		const amrex::Array4< const amrex::Real > &	tau11,
		const amrex::Array4< const amrex::Real > &	tau22,
		const amrex::Array4< const amrex::Real > &	tau33,
		const amrex::Array4< const amrex::Real > &	tau12,
		const amrex::Array4< const amrex::Real > &	tau13,
		const amrex::Array4< const amrex::Real > &	tau21,
		const amrex::Array4< const amrex::Real > &	tau23,
		const amrex::Array4< const amrex::Real > &	tau31,
		const amrex::Array4< const amrex::Real > &	tau32,
		const amrex::Array4< const amrex::Real > &	detJ,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &	dxInv,
		const amrex::Array4< const amrex::Real > &	mf_m,
		const amrex::Array4< const amrex::Real > &	mf_u,
		const amrex::Array4< const amrex::Real > &	mf_v
	)

Referenced by erf_slow_rhs_pre().

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DiffusionSrcForState_N()

void DiffusionSrcForState_N	(	const amrex::Box &	bx,
		const amrex::Box &	domain,
		int	start_comp,
		int	num_comp,
		const bool &	exp_most,
		const amrex::Array4< const amrex::Real > &	u,
		const amrex::Array4< const amrex::Real > &	v,
		const amrex::Array4< const amrex::Real > &	cell_data,
		const amrex::Array4< const amrex::Real > &	cell_prim,
		const amrex::Array4< amrex::Real > &	cell_rhs,
		const amrex::Array4< amrex::Real > &	xflux,
		const amrex::Array4< amrex::Real > &	yflux,
		const amrex::Array4< amrex::Real > &	zflux,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &	cellSizeInv,
		const amrex::Array4< const amrex::Real > &	SmnSmn_a,
		const amrex::Array4< const amrex::Real > &	mf_m,
		const amrex::Array4< const amrex::Real > &	mf_u,
		const amrex::Array4< const amrex::Real > &	mf_v,
		amrex::Array4< amrex::Real > &	hfx_z,
		amrex::Array4< amrex::Real > &	qfx1_z,
		amrex::Array4< amrex::Real > &	qfx2_z,
		amrex::Array4< amrex::Real > &	diss,
		const amrex::Array4< const amrex::Real > &	mu_turb,
		const SolverChoice &	solverChoice,
		const int	level,
		const amrex::Array4< const amrex::Real > &	tm_arr,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM >	grav_gpu,
		const amrex::BCRec *	bc_ptr,
		const bool	use_most
	)

Referenced by erf_slow_rhs_post(), and erf_slow_rhs_pre().

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DiffusionSrcForState_T()

void DiffusionSrcForState_T	(	const amrex::Box &	bx,
		const amrex::Box &	domain,
		int	start_comp,
		int	num_comp,
		const bool &	exp_most,
		const bool &	rot_most,
		const amrex::Array4< const amrex::Real > &	u,
		const amrex::Array4< const amrex::Real > &	v,
		const amrex::Array4< const amrex::Real > &	cell_data,
		const amrex::Array4< const amrex::Real > &	cell_prim,
		const amrex::Array4< amrex::Real > &	cell_rhs,
		const amrex::Array4< amrex::Real > &	xflux,
		const amrex::Array4< amrex::Real > &	yflux,
		const amrex::Array4< amrex::Real > &	zflux,
		const amrex::Array4< const amrex::Real > &	z_nd,
		const amrex::Array4< const amrex::Real > &	ax,
		const amrex::Array4< const amrex::Real > &	ay,
		const amrex::Array4< const amrex::Real > &	az,
		const amrex::Array4< const amrex::Real > &	detJ,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM > &	dxInv,
		const amrex::Array4< const amrex::Real > &	SmnSmn_a,
		const amrex::Array4< const amrex::Real > &	mf_m,
		const amrex::Array4< const amrex::Real > &	mf_u,
		const amrex::Array4< const amrex::Real > &	mf_v,
		amrex::Array4< amrex::Real > &	hfx_x,
		amrex::Array4< amrex::Real > &	hfx_y,
		amrex::Array4< amrex::Real > &	hfx_z,
		amrex::Array4< amrex::Real > &	qfx1_x,
		amrex::Array4< amrex::Real > &	qfx1_y,
		amrex::Array4< amrex::Real > &	qfx1_z,
		amrex::Array4< amrex::Real > &	qfx2_z,
		amrex::Array4< amrex::Real > &	diss,
		const amrex::Array4< const amrex::Real > &	mu_turb,
		const SolverChoice &	solverChoice,
		const int	level,
		const amrex::Array4< const amrex::Real > &	tm_arr,
		const amrex::GpuArray< amrex::Real, AMREX_SPACEDIM >	grav_gpu,
		const amrex::BCRec *	bc_ptr,
		const bool	use_most
	)

Referenced by erf_slow_rhs_post(), and erf_slow_rhs_pre().

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